STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH52138.1IS701 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)    
Predicted Functional Partners:
OKH35641.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.724
OKH51684.1
Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
OKH53575.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
OKH35360.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.568
OKH52137.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
OKH53748.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
OKH43582.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
OKH52135.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
OKH52136.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.510
OKH53882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.501
Your Current Organism:
Calothrix sp. HK06
NCBI taxonomy Id: 1137096
Other names: C. sp. HK-06, Calothrix sp. HK-06, Calothrix sp. IAM M-290, Calothrix sp. NIES-2101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.