STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIES2101_32810Hypothetical protein; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
OKH43160.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.854
OKH52589.1
Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.851
OKH42577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.832
OKH32628.1
Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.818
OKH43159.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.783
OKH56376.1
8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.780
OKH46951.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.777
OKH52809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.754
OKH40341.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.742
OKH38899.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.736
Your Current Organism:
Calothrix sp. HK06
NCBI taxonomy Id: 1137096
Other names: C. sp. HK-06, Calothrix sp. HK-06, Calothrix sp. IAM M-290, Calothrix sp. NIES-2101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.