STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067N6A8DDE-1 domain-containing protein. (699 aa)    
Predicted Functional Partners:
A0A067NZC7
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.947
A0A067N7A0
Uncharacterized protein.
    
 0.698
A0A067NW50
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.678
A0A067NXW2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.678
A0A067N840
Ubiquitin-like domain-containing protein.
   
  0.663
A0A067NEB5
Uncharacterized protein.
   
  0.663
A0A067NFH0
Ubiquitin-like domain-containing protein.
   
  0.663
A0A067NT74
Uncharacterized protein.
   
  0.663
A0A067NMN0
Uncharacterized protein.
   
  0.650
A0A067NND6
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.650
Your Current Organism:
Pleurotus ostreatus
NCBI taxonomy Id: 1137138
Other names: P. ostreatus PC15, Pleurotus ostreatus PC15
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