STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067NDD5Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
A0A067NLT5
Uncharacterized protein.
   
 0.802
A0A067NTE8
Uncharacterized protein.
   
 0.802
A0A067NGV7
AA_TRNA_LIGASE_II domain-containing protein.
 
      0.798
A0A067NTK8
TFIID_20kDa domain-containing protein.
    
 0.742
A0A067NG53
SCA7 domain-containing protein.
    
 0.741
A0A067P1A1
Uncharacterized protein.
    
 0.734
A0A067NM51
Uncharacterized protein.
    
 0.729
A0A067NTS3
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.729
A0A067P183
Uncharacterized protein.
    
 0.723
A0A067NZ63
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.722
Your Current Organism:
Pleurotus ostreatus
NCBI taxonomy Id: 1137138
Other names: P. ostreatus PC15, Pleurotus ostreatus PC15
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