STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067NT57Polysaccharide lyase family 1 protein. (313 aa)    
Predicted Functional Partners:
A0A067PC25
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.805
A0A067NY89
RING-type domain-containing protein.
    
 0.707
A0A067NLK5
Polysaccharide lyase family 1 protein.
  
  
 
0.694
A0A067NUV8
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
   
 
 0.686
A0A067NA34
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.667
A0A067NPL8
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.667
A0A067P1U1
Uncharacterized protein.
    
 0.667
A0A067NMR5
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.660
A0A067NP99
Ubiquitin-like domain-containing protein.
    
 0.656
A0A067NR75
Ubiquitin-like domain-containing protein.
    
 0.643
Your Current Organism:
Pleurotus ostreatus
NCBI taxonomy Id: 1137138
Other names: P. ostreatus PC15, Pleurotus ostreatus PC15
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