A0A067NTI5 protein (Pleurotus ostreatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A067NTI5

Uncharacterized protein. (170 aa)

Predicted Functional Partners:

A0A067NHV1

0.588

A0A067NV61

0.588

A0A067NR75

0.584

A0A067NUP8

0.584

A0A067P9Q3

0.571

A0A067N2I3

0.563

A0A067N5U3

0.522

A0A067NW97

0.520

A0A067P050

0.520

A0A067NXW2

0.518

Your Current Organism:

Pleurotus ostreatus

NCBI taxonomy Id: 1137138
Other names: P. ostreatus PC15, Pleurotus ostreatus PC15

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067N2I3	A0A067NR75	Phosphatase tensin-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.720
A0A067N2I3	A0A067NTI5	Phosphatase tensin-type domain-containing protein.	Uncharacterized protein.	0.563
A0A067N2I3	A0A067NUP8	Phosphatase tensin-type domain-containing protein.	Uncharacterized protein.	0.545
A0A067N2I3	A0A067NXW2	Phosphatase tensin-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.671
A0A067N2I3	A0A067P9Q3	Phosphatase tensin-type domain-containing protein.	TPR_REGION domain-containing protein.	0.620
A0A067N5U3	A0A067NTI5	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.522
A0A067NHV1	A0A067NTI5	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	Uncharacterized protein.	0.588
A0A067NHV1	A0A067NV61	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	Uncharacterized protein.	0.888
A0A067NR75	A0A067N2I3	Ubiquitin-like domain-containing protein.	Phosphatase tensin-type domain-containing protein.	0.720
A0A067NR75	A0A067NTI5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.584
A0A067NR75	A0A067NUP8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.702
A0A067NR75	A0A067NXW2	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.985
A0A067NR75	A0A067P9Q3	Ubiquitin-like domain-containing protein.	TPR_REGION domain-containing protein.	0.650
A0A067NTI5	A0A067N2I3	Uncharacterized protein.	Phosphatase tensin-type domain-containing protein.	0.563
A0A067NTI5	A0A067N5U3	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.522
A0A067NTI5	A0A067NHV1	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.588
A0A067NTI5	A0A067NR75	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.584
A0A067NTI5	A0A067NUP8	Uncharacterized protein.	Uncharacterized protein.	0.584
A0A067NTI5	A0A067NV61	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A067NTI5	A0A067NW97	Uncharacterized protein.	Uncharacterized protein.	0.520