STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067NXH7HMG box domain-containing protein. (311 aa)    
Predicted Functional Partners:
A0A067NUB3
BSD domain-containing protein.
    
 0.824
A0A067N9K5
Uncharacterized protein.
   
 0.817
A0A067NI56
Uncharacterized protein.
    
 0.817
A0A067NIR2
Uncharacterized protein.
    
 0.813
A0A067NA04
Histone H2A; Belongs to the histone H2A family.
   
 0.808
A0A067NAP9
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.804
A0A067NM39
VWFA domain-containing protein.
    
 0.793
A0A067N6Z6
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.787
A0A067NSN9
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.749
A0A067PA63
Helicase ATP-binding domain-containing protein.
    
 0.748
Your Current Organism:
Pleurotus ostreatus
NCBI taxonomy Id: 1137138
Other names: P. ostreatus PC15, Pleurotus ostreatus PC15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.