STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515115_03974Unannotated protein. (330 aa)    
Predicted Functional Partners:
GCA_000515115_03458
Unannotated protein.
  
  
 0.884
GCA_000515115_03340
Unannotated protein.
  
 
 0.868
GCA_000515115_03984
Unannotated protein.
 
  
 0.807
GCA_000515115_03983
Unannotated protein.
 
     0.715
GCA_000515115_03970
Unannotated protein.
  
 
 0.603
GCA_000515115_00276
Unannotated protein.
  
 
 0.587
GCA_000515115_02561
Unannotated protein.
  
 
 0.587
GCA_000515115_02562
Unannotated protein.
  
 
 0.587
GCA_000515115_03190
Unannotated protein.
    
 0.546
GCA_000515115_01871
Unannotated protein.
 
  
  0.522
Your Current Organism:
Nocardiopsis sp. CNT312
NCBI taxonomy Id: 1137268
Other names: N. sp. CNT312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.