STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D777_00869Putative fucosyl transferase. (323 aa)    
Predicted Functional Partners:
D777_00868
Glycosyltransferase.
 
 
 0.852
D777_00870
Putative polysaccharide biosynthesis protein.
 
  
 0.830
D777_00867
Putative CapK protein.
    
  0.821
D777_00871
Hypothetical protein.
 
 
 0.797
D777_01980
Capsular polysaccharide biosynthesis protein.
 
  
 0.741
D777_00848
Sugar transferase.
 
  
 0.721
D777_01986
UDP-glucose 4-epimerase.
 
 
 0.616
D777_00856
Long-chain-fatty-acid--CoA ligase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.595
D777_02151
Alpha,alpha-trehalose-phosphate synthase.
  
 0.559
D777_00857
Glycosyl transferase.
 
 
 0.533
Your Current Organism:
Marinobacter nitratireducens
NCBI taxonomy Id: 1137280
Other names: JCM 18428, M. nitratireducens, MTCC 11704, Marinobacter nitratireducens Vaidya et al. 2015, Marinobacter sp. AK21, strain AK21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.