STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (328 aa)    
Predicted Functional Partners:
D778_01635
Glucose-6-phosphate isomerase.
  
 0.989
D778_02443
Fructose-bisphosphate aldolase class II.
 
 
 0.975
D778_02036
Fructose-1,6-bisphosphatase, type I; Belongs to the FBPase class 1 family.
    
 0.962
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  
 0.938
D778_01508
Mannose-6-phosphate isomerase.
  
  
 0.929
fsa
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.927
D778_01269
Transketolase.
    
  0.903
D778_01270
Transketolase.
    
  0.903
D778_02628
Arabinose 5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
  
 
 0.876
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
 0.872
Your Current Organism:
Xanthomarina gelatinilytica
NCBI taxonomy Id: 1137281
Other names: Formosa sp. AK20, JCM 18821, MTCC 11705, X. gelatinilytica, Xanthomarina gelatinilytica Vaidya et al. 2015, strain AK20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.