STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAGlutaminase; Belongs to the glutaminase family. (304 aa)    
Predicted Functional Partners:
gcvT
Aminomethyltransferase (glycine cleavage system T protein).
    
  0.978
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
     
 0.919
D778_01660
Glucosamine--fructose-6-phosphate aminotransferase.
     
 0.901
pruA
Delta-1-pyrroline-5-carboxylate dehydrogenase.
     
 0.900
D778_00144
Hypothetical protein.
       0.718
D778_01299
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.704
D778_01677
NADP-specific glutamate dehydrogenase.
     
 0.704
D778_00145
Pterin-4-alpha-carbinolamine dehydratase.
  
    0.602
D778_00141
Xaa-Pro aminopeptidase.
  
   0.532
D778_00282
Ketoglutarate semialdehyde dehydrogenase.
     
 0.510
Your Current Organism:
Xanthomarina gelatinilytica
NCBI taxonomy Id: 1137281
Other names: Formosa sp. AK20, JCM 18821, MTCC 11705, X. gelatinilytica, Xanthomarina gelatinilytica Vaidya et al. 2015, strain AK20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.