STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctaAHeme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (339 aa)    
Predicted Functional Partners:
D778_02155
Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB.
 
 0.993
D778_00354
Cytochrome c oxidase subunit CcoN.
    
  0.850
D778_02144
Cytochrome c oxidase polypeptide I.
 
 
 0.712
D778_00538
tRNA nucleotidyltransferase.
       0.690
D778_02143
Cytochrome c oxidase polypeptide II.
 
 
 0.662
D778_02443
Fructose-bisphosphate aldolase class II.
 
      0.596
D778_00536
Hypothetical protein.
       0.534
D778_02156
Cytochrome c oxidase polypeptide CoxO.
 
 
 0.519
nirK
Copper-containing nitrite reductase.
 
  
 0.518
hemH
Ferrochelatase, protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.516
Your Current Organism:
Xanthomarina gelatinilytica
NCBI taxonomy Id: 1137281
Other names: Formosa sp. AK20, JCM 18821, MTCC 11705, X. gelatinilytica, Xanthomarina gelatinilytica Vaidya et al. 2015, strain AK20
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