STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D778_00541Putative hexapeptide transferase family protein. (212 aa)    
Predicted Functional Partners:
D778_00540
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.883
D778_00542
Putative glycosyltransferase.
  
    0.776
D778_00092
4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase.
 
 
  0.716
D778_02358
Bacterial sugar transferase.
  
  
 0.597
D778_00539
TsaC protein.
  
    0.555
D778_01494
DegT/DnrJ/EryC1/StrS aminotransferase.
 
 
  0.477
D778_00229
Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.436
D778_02241
Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.432
D778_00538
tRNA nucleotidyltransferase.
       0.409
D778_02602
Hypothetical protein.
  
  
 0.406
Your Current Organism:
Xanthomarina gelatinilytica
NCBI taxonomy Id: 1137281
Other names: Formosa sp. AK20, JCM 18821, MTCC 11705, X. gelatinilytica, Xanthomarina gelatinilytica Vaidya et al. 2015, strain AK20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.