STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D778_00639Response regulator receiver. (105 aa)    
Predicted Functional Partners:
D778_00640
Response regulator receiver sensor signal transduction histidine kinase.
 
 0.999
D778_01343
Hypothetical protein.
 
 0.985
D778_02802
Sensor histidine kinase.
  
 0.978
D778_02804
Transcriptional regulator, NifA subfamily, Fis Family.
  
 0.918
D778_02226
Sensory transduction histidine kinase.
  
 0.914
D778_01493
Two-component system sensor histidine kinase/response.
  
 0.906
D778_02227
Two-component response regulator.
 
 0.786
D778_02801
Two-component response regulator.
 
 0.777
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; In the N-terminal section; belongs to the DHBP synthase family.
   
 0.761
D778_00638
Helix-turn-helix- domain containing protein, AraC type.
 
     0.693
Your Current Organism:
Xanthomarina gelatinilytica
NCBI taxonomy Id: 1137281
Other names: Formosa sp. AK20, JCM 18821, MTCC 11705, X. gelatinilytica, Xanthomarina gelatinilytica Vaidya et al. 2015, strain AK20
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.