STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D778_01219Septum formation protein Maf; Belongs to the Maf family. (196 aa)    
Predicted Functional Partners:
D778_01218
(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase.
       0.782
D778_01323
RNA methyltransferase, TrmA family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
      0.775
D778_00937
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
    0.736
D778_00731
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.734
D778_01637
Tryptophan 2,3-dioxygenase.
    
   0.671
D778_02305
Rod shape-determining protein MreC.
  
  
 0.616
D778_01220
Small-conductance mechanosensitive channel.
       0.605
D778_01216
Hypothetical protein.
       0.553
D778_01217
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.
       0.553
D778_01896
Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP.
 
     0.531
Your Current Organism:
Xanthomarina gelatinilytica
NCBI taxonomy Id: 1137281
Other names: Formosa sp. AK20, JCM 18821, MTCC 11705, X. gelatinilytica, Xanthomarina gelatinilytica Vaidya et al. 2015, strain AK20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.