STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D778_01660Glucosamine--fructose-6-phosphate aminotransferase. (615 aa)    
Predicted Functional Partners:
D778_01635
Glucose-6-phosphate isomerase.
  
 
 0.962
D778_00389
Carbamoyl-phosphate synthase large chain.
   
 0.936
D778_01756
Amidophosphoribosyltransferase.
    
 0.917
D778_00684
Carbamoyl-phosphate synthase small chain.
    
 0.912
D778_01508
Mannose-6-phosphate isomerase.
     
 0.911
glsA
Glutaminase; Belongs to the glutaminase family.
     
 0.901
D778_00116
Hypothetical protein.
  
 
 0.894
D778_00366
Phosphoribosylformylglycinamidine synthase, synthetase subunit.
    
 0.871
D778_01659
Hypothetical protein.
       0.816
D778_00379
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.797
Your Current Organism:
Xanthomarina gelatinilytica
NCBI taxonomy Id: 1137281
Other names: Formosa sp. AK20, JCM 18821, MTCC 11705, X. gelatinilytica, Xanthomarina gelatinilytica Vaidya et al. 2015, strain AK20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.