STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D778_019883-oxoacyl-[acyl-carrier-protein] synthase III. (355 aa)    
Predicted Functional Partners:
D778_01980
3-oxoacyl-[acyl-carrier-protein] synthase, KASII.
 
 
  0.991
D778_01975
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.982
D778_01992
3-oxoacyl-[acyl-carrier-protein] synthase, KASI; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  0.979
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.972
accB
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.968
D778_02442
Acetyl-coenzyme A carboxyl transferase beta chain.
  
 
 0.968
D778_01993
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
  0.961
D778_01984
Hypothetical protein.
 
     0.952
D778_01985
Hypothetical protein.
 
     0.952
D778_01982
ABC-type multidrug transport system, permease component.
 
     0.948
Your Current Organism:
Xanthomarina gelatinilytica
NCBI taxonomy Id: 1137281
Other names: Formosa sp. AK20, JCM 18821, MTCC 11705, X. gelatinilytica, Xanthomarina gelatinilytica Vaidya et al. 2015, strain AK20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.