STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D778_02023Putative lipoprotein. (266 aa)    
Predicted Functional Partners:
D778_02024
OmpA family protein.
     
 0.776
D778_02025
Hypothetical protein.
       0.762
D778_02823
Phosphate regulon sensor protein PhoR (SphS).
    
  0.755
D778_02022
Transcription accessory protein.
       0.547
D778_00923
Terminal quinol oxidase.
 
     0.505
D778_00257
Hypothetical protein.
  
     0.493
D778_00769
Hypothetical protein.
    
   0.473
D778_02026
Hypothetical protein.
       0.464
D778_02027
Hypothetical protein.
       0.441
D778_02802
Sensor histidine kinase.
  
 
  0.424
Your Current Organism:
Xanthomarina gelatinilytica
NCBI taxonomy Id: 1137281
Other names: Formosa sp. AK20, JCM 18821, MTCC 11705, X. gelatinilytica, Xanthomarina gelatinilytica Vaidya et al. 2015, strain AK20
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.