STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418205_00739Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. (399 aa)    
Predicted Functional Partners:
GCA_001418205_00740
Unannotated protein.
 
 
 0.997
GCA_001418205_00737
Unannotated protein.
 
 
 0.984
GCA_001418205_00738
Unannotated protein.
 
  
 0.974
GCA_001418205_00736
Unannotated protein.
 
  
 0.972
GCA_001418205_00631
Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.949
GCA_001418205_00604
Unannotated protein.
  
 
 0.910
GCA_001418205_00735
Unannotated protein.
 
    0.885
GCA_001418205_00816
Unannotated protein.
  
 
 0.876
GCA_001418205_00649
Unannotated protein.
  
 
 0.853
Ga0061065_1344
Unannotated protein.
  
 
 0.852
Your Current Organism:
Marinomonas fungiae
NCBI taxonomy Id: 1137284
Other names: JCM 18476, LMG 27065, LMG:27065, M. fungiae, Marinomonas fungiae Kumari et al. 2014, Marinomonas sp. AN44, strain AN44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.