STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418205_01889Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (108 aa)    
Predicted Functional Partners:
recR
Unannotated protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
 
  
 0.993
dnaX
Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
  
 0.943
rnd
Unannotated protein; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
       0.814
GCA_001418205_00867
Unannotated protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.766
GCA_001418205_01885
Unannotated protein; Belongs to the UPF0260 family.
       0.766
GCA_001418205_01886
Unannotated protein.
       0.761
yajC
Unannotated protein; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
  
 
  0.669
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
    0.631
GCA_001418205_01884
Unannotated protein.
       0.602
rimP
Unannotated protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
 
    0.574
Your Current Organism:
Marinomonas fungiae
NCBI taxonomy Id: 1137284
Other names: JCM 18476, LMG 27065, LMG:27065, M. fungiae, Marinomonas fungiae Kumari et al. 2014, Marinomonas sp. AN44, strain AN44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.