STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GZ78_13175Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)    
Predicted Functional Partners:
GZ78_13160
Hemolysin-coregulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
GZ78_27845
Hemolysin-coregulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.632
GZ78_28000
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.605
GZ78_27945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.604
GZ78_27925
Type VI secretion system lysozyme-related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.602
GZ78_05810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.534
GZ78_21860
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
     
 0.488
GZ78_27885
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.456
GZ78_27970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.455
GZ78_27900
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.
  
     0.449
Your Current Organism:
Endozoicomonas numazuensis
NCBI taxonomy Id: 1137799
Other names: DSM 25634, E. numazuensis, Endozoicomonas numazuensis Nishijima et al. 2013, Endozoicomonas sp. HC46, Endozoicomonas sp. HC50, NBRC 108893, strain HC50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.