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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GZ78_20815Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)    
Predicted Functional Partners:
GZ78_13350
Restriction endonuclease subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
     0.773
GZ78_13365
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.772
GZ78_13345
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
GZ78_13755
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
GZ78_07570
Restriction endonuclease HindVIIP subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
GZ78_07610
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
     0.429
GZ78_06465
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
Your Current Organism:
Endozoicomonas numazuensis
NCBI taxonomy Id: 1137799
Other names: DSM 25634, E. numazuensis, Endozoicomonas numazuensis Nishijima et al. 2013, Endozoicomonas sp. HC46, Endozoicomonas sp. HC50, NBRC 108893, strain HC50
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