STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM27392.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
secA
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
     
 0.740
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.645
SDM27420.1
Gluconate kinase, FGGY family; Belongs to the FGGY kinase family.
       0.623
SDM27453.1
gluconate:H+ symporter, GntP family.
       0.542
SDM26119.1
WD40-like Beta Propeller Repeat.
  
   0.498
SDM87465.1
WD40-like Beta Propeller Repeat.
  
   0.498
SDN31174.1
Hypothetical protein.
  
   0.474
SDM27368.1
Cyanate permease.
       0.423
Your Current Organism:
Geodermatophilus siccatus
NCBI taxonomy Id: 1137991
Other names: CCUG 62765, DSM 45419, G. siccatus, Geodermatophilus siccatus Montero-Calasanz et al. 2013 emend. Montero-Calasanz et al. 2017, Geodermatophilus sp. CF6/1, MTCC 11414, strain CF6/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.