STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN27624.1Glutathione-independent formaldehyde dehydrogenase. (406 aa)    
Predicted Functional Partners:
SDL87581.1
Glutathione-independent formaldehyde dehydrogenase.
  
  
 
0.831
SDM95892.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
  0.827
SDM76701.1
Threonine dehydrogenase.
  
  
 
0.795
SDN19705.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.748
SDL65702.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.743
SDN48504.1
Threonine dehydrogenase.
  
  
 
0.716
SDN46368.1
Sarcosine oxidase subunit alpha.
 
 
 0.697
SDN22071.1
L-threonine ammonia-lyase.
   
 
  0.650
SDL74667.1
Ferredoxin-NADP reductase.
 
 
 0.646
SDN46461.1
Dimethylglycine oxidase; Belongs to the GcvT family.
  
 
 0.633
Your Current Organism:
Geodermatophilus siccatus
NCBI taxonomy Id: 1137991
Other names: CCUG 62765, DSM 45419, G. siccatus, Geodermatophilus siccatus Montero-Calasanz et al. 2013 emend. Montero-Calasanz et al. 2017, Geodermatophilus sp. CF6/1, MTCC 11414, strain CF6/1
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