STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX54395.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (417 aa)    
Predicted Functional Partners:
SDX54361.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDX54293.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.993
SDX54328.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.993
SDX54434.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
 
 
 0.984
SDY93762.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-).
 
 0.967
SDY47167.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.965
SDY93700.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-).
 
 
 0.962
SDY20894.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.959
SDY47036.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.956
SDX83763.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.946
Your Current Organism:
Geodermatophilus africanus
NCBI taxonomy Id: 1137993
Other names: CCUG 62969, DSM 45422, G. africanus, Geodermatophilus africanus Montero-Calasanz et al. 2013 emend. Montero-Calasanz et al. 2017, Geodermatophilus sp. CF 11/1, MTCC 11556, strain CF11/1
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