STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB57477.1Methyltransferase domain-containing protein. (195 aa)    
Predicted Functional Partners:
SCB57478.1
Toxin ParE1/3/4.
       0.773
SCB57479.1
Antitoxin ParD1/3/4.
       0.768
SCB62028.1
Nodulation protein A (NodA).
    
 0.726
SCB62029.1
Adenylylsulphate kinase.
    
 0.726
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.715
SCB58966.1
N-methylglutamate dehydrogenase subunit C.
  
 
  0.636
SCB59526.1
Sarcosine oxidase subunit alpha.
  
 
  0.636
SCB58037.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
   
  0.604
SCB59081.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
   
  0.604
SCB57335.1
Transcriptional regulator, ArsR family.
   
 0.536
Your Current Organism:
Rhizobium aethiopicum
NCBI taxonomy Id: 1138170
Other names: HAMBI 3550, LMG 29711, LMG:29711, R. aethiopicum, Rhizobium aethiopicum Aserse et al. 2017, Rhizobium sp. HBR23, Rhizobium sp. HBR26, Rhizobium sp. HBR3, Rhizobium sp. HBR31, Rhizobium sp. HBR50, Rhizobium sp. HBR7, strain HBR26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.