STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB57647.1Osmoprotectant transport system ATP-binding protein. (314 aa)    
Predicted Functional Partners:
SCB57645.1
Osmoprotectant transport system substrate-binding protein.
 
 0.998
SCB57646.1
Osmoprotectant transport system permease protein.
 0.998
SCB57648.1
Osmoprotectant transport system permease protein.
 0.998
SCB62349.1
ABC-2 type transport system permease protein.
 
      0.695
SCB58948.1
Glycine betaine/proline transport system ATP-binding protein.
  
 
 
0.682
SCB57124.1
Glycine betaine/proline transport system ATP-binding protein.
  
 
 
0.679
SCB58387.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
     
 0.658
SCB57649.1
Lactoylglutathione lyase.
       0.620
SCB62350.1
ABC-2 type transport system permease protein.
 
      0.537
SCB57650.1
Beta-mannosidase.
       0.476
Your Current Organism:
Rhizobium aethiopicum
NCBI taxonomy Id: 1138170
Other names: HAMBI 3550, LMG 29711, LMG:29711, R. aethiopicum, Rhizobium aethiopicum Aserse et al. 2017, Rhizobium sp. HBR23, Rhizobium sp. HBR26, Rhizobium sp. HBR3, Rhizobium sp. HBR31, Rhizobium sp. HBR50, Rhizobium sp. HBR7, strain HBR26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.