STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB58774.1Dihydroxyacetone kinase DhaL subunit. (214 aa)    
Predicted Functional Partners:
SCB56269.1
Dihydroxyacetone kinase.
 
0.999
SCB58773.1
Dihydroxyacetone kinase DhaK subunit.
  
  0.998
SCB62208.1
GAF domain-containing protein.
    
 
 0.940
SCB61439.1
Phosphocarrier protein.
  
 
 0.734
SCB58765.1
Ribose 5-phosphate isomerase B.
 
  
 0.724
SCB58764.1
Triosephosphate isomerase.
 
  
 0.708
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.687
SCB58561.1
Triosephosphate isomerase.
 
  
 0.673
SCB58560.1
Ribose 5-phosphate isomerase B.
 
  
 0.645
SCB58564.1
L-erythritol 4-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.644
Your Current Organism:
Rhizobium aethiopicum
NCBI taxonomy Id: 1138170
Other names: HAMBI 3550, LMG 29711, LMG:29711, R. aethiopicum, Rhizobium aethiopicum Aserse et al. 2017, Rhizobium sp. HBR23, Rhizobium sp. HBR26, Rhizobium sp. HBR3, Rhizobium sp. HBR31, Rhizobium sp. HBR50, Rhizobium sp. HBR7, strain HBR26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.