STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001662055_04285Unannotated protein. (269 aa)    
Predicted Functional Partners:
GCA_001662055_04284
Unannotated protein.
 
 0.986
GCA_001662055_04287
Unannotated protein.
 
  
 0.976
GCA_001662055_04291
Unannotated protein.
 
 
 0.970
GCA_001662055_04286
Unannotated protein.
 
 
 0.922
GCA_001662055_04290
Unannotated protein.
 
 
 0.842
GCA_001662055_02748
Unannotated protein.
  
 
 0.836
GCA_001662055_04283
Unannotated protein.
 
     0.835
GCA_001662055_04282
Unannotated protein.
 
     0.833
GCA_001662055_04281
Unannotated protein.
 
  
  0.828
GCA_001662055_00194
Unannotated protein.
  
 
 0.823
Your Current Organism:
Rhizobium bangladeshense
NCBI taxonomy Id: 1138189
Other names: DSM 29287, LMG 28442, LMG:28442, R. bangladeshense, Rhizobium bangladeshense Rashid et al. 2015, Rhizobium sp. BLR129, Rhizobium sp. BLR153, Rhizobium sp. BLR154, Rhizobium sp. BLR175, Rhizobium sp. BLR99, strain BLR175
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.