STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQW22106.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CvfB family. (288 aa)    
Predicted Functional Partners:
AQW22105.1
Site-specific tyrosine recombinase XerD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.867
AQW22103.1
Ribulose phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.866
AQW22102.1
SMC-Scp complex subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
    0.865
AQW22101.1
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.
  
    0.862
AQW22104.1
Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.861
AQW22107.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.
  
    0.713
AQW22100.1
ECF transporter S component; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.590
AQW22099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.559
AQW22098.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.489
AQW22097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.487
Your Current Organism:
Lactobacillus curieae
NCBI taxonomy Id: 1138822
Other names: CCTCC M 2011381, JCM 18524, L. curieae, Lactobacillus curieae Lei et al. 2013, Lactobacillus sp. CCTCC M 2011381, strain S1L19
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