STRINGSTRING
ABB56103.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB56103.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB56103.1annotation not available (399 aa)    
Predicted Functional Partners:
ABB58626.1
annotation not available (353 aa)
   
  0.903
ABB56102.1
annotation not available (186 aa)
              0.845
ABB56182.1
annotation not available (388 aa)
   
   
  0.666
SEE0026
annotation not available (476 aa)
     
 
  0.619
ABB58302.1
annotation not available (176 aa)
           
  0.558
ABB56156.1
annotation not available (199 aa)
 
 
 
  0.521
ABB56104.1
annotation not available (217 aa)
              0.494
ABB56528.1
annotation not available (229 aa)
     
 
  0.432
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis; Belongs to the IspH family (398 aa)
         
  0.430
ABB56530.1
annotation not available (837 aa)
   
   
  0.412
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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