Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABB56188.1 | ABB56276.1 | Synpcc7942_0156 | Synpcc7942_0244 | Phosphoglucomutase. | Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.996 |
| ABB56188.1 | ABB56570.1 | Synpcc7942_0156 | Synpcc7942_0538 | Phosphoglucomutase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.939 |
| ABB56188.1 | ABB56877.1 | Synpcc7942_0156 | Synpcc7942_0846 | Phosphoglucomutase. | Conserved hypothetical protein; Belongs to the glucose-6-phosphate 1-epimerase family. | 0.917 |
| ABB56188.1 | ABB57049.1 | Synpcc7942_0156 | Synpcc7942_1019 | Phosphoglucomutase. | 4-alpha-glucanotransferase. | 0.927 |
| ABB56188.1 | ABB58141.1 | Synpcc7942_0156 | Synpcc7942_2111 | Phosphoglucomutase. | Xylose repressor. | 0.917 |
| ABB56188.1 | glgB | Synpcc7942_0156 | Synpcc7942_1085 | Phosphoglucomutase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. | 0.919 |
| ABB56188.1 | glgC | Synpcc7942_0156 | Synpcc7942_0603 | Phosphoglucomutase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.939 |
| ABB56188.1 | glk | Synpcc7942_0156 | Synpcc7942_0221 | Phosphoglucomutase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.926 |
| ABB56188.1 | pgi | Synpcc7942_0156 | Synpcc7942_2029 | Phosphoglucomutase. | Glucose-6-phosphate isomerase. | 0.985 |
| ABB56188.1 | rpiA | Synpcc7942_0156 | Synpcc7942_0584 | Phosphoglucomutase. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.930 |
| ABB56276.1 | ABB56188.1 | Synpcc7942_0244 | Synpcc7942_0156 | Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Phosphoglucomutase. | 0.996 |
| ABB56276.1 | ABB57049.1 | Synpcc7942_0244 | Synpcc7942_1019 | Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 4-alpha-glucanotransferase. | 0.997 |
| ABB56276.1 | glgB | Synpcc7942_0244 | Synpcc7942_1085 | Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. | 0.999 |
| ABB56276.1 | glgC | Synpcc7942_0244 | Synpcc7942_0603 | Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.996 |
| ABB56276.1 | pgi | Synpcc7942_0244 | Synpcc7942_2029 | Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glucose-6-phosphate isomerase. | 0.786 |
| ABB56570.1 | ABB56188.1 | Synpcc7942_0538 | Synpcc7942_0156 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Phosphoglucomutase. | 0.939 |
| ABB56570.1 | ABB56877.1 | Synpcc7942_0538 | Synpcc7942_0846 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Conserved hypothetical protein; Belongs to the glucose-6-phosphate 1-epimerase family. | 0.808 |
| ABB56570.1 | ABB58141.1 | Synpcc7942_0538 | Synpcc7942_2111 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Xylose repressor. | 0.840 |
| ABB56570.1 | glgB | Synpcc7942_0538 | Synpcc7942_1085 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. | 0.441 |
| ABB56570.1 | glk | Synpcc7942_0538 | Synpcc7942_0221 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.873 |
page 1 of 4