Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB56302.1 | ABB56679.1 | Synpcc7942_0270 | Synpcc7942_0647 | TPR repeat. | Conserved hypothetical protein. | 0.570 |
ABB56302.1 | ABB58414.1 | Synpcc7942_0270 | Synpcc7942_2384 | TPR repeat. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.593 |
ABB56678.1 | ABB56679.1 | Synpcc7942_0646 | Synpcc7942_0647 | Hypothetical protein. | Conserved hypothetical protein. | 0.442 |
ABB56678.1 | hemL | Synpcc7942_0646 | Synpcc7942_0645 | Hypothetical protein. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | 0.773 |
ABB56679.1 | ABB56302.1 | Synpcc7942_0647 | Synpcc7942_0270 | Conserved hypothetical protein. | TPR repeat. | 0.570 |
ABB56679.1 | ABB56678.1 | Synpcc7942_0647 | Synpcc7942_0646 | Conserved hypothetical protein. | Hypothetical protein. | 0.442 |
ABB56679.1 | ABB56680.1 | Synpcc7942_0647 | Synpcc7942_0648 | Conserved hypothetical protein. | Hypothetical protein. | 0.520 |
ABB56679.1 | ABB58414.1 | Synpcc7942_0647 | Synpcc7942_2384 | Conserved hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.431 |
ABB56679.1 | hemL | Synpcc7942_0647 | Synpcc7942_0645 | Conserved hypothetical protein. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | 0.442 |
ABB56679.1 | sek0027 | Synpcc7942_0647 | Synpcc7942_0443 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.417 |
ABB56680.1 | ABB56679.1 | Synpcc7942_0648 | Synpcc7942_0647 | Hypothetical protein. | Conserved hypothetical protein. | 0.520 |
ABB58414.1 | ABB56302.1 | Synpcc7942_2384 | Synpcc7942_0270 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | TPR repeat. | 0.593 |
ABB58414.1 | ABB56679.1 | Synpcc7942_2384 | Synpcc7942_0647 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | Conserved hypothetical protein. | 0.431 |
hemL | ABB56678.1 | Synpcc7942_0645 | Synpcc7942_0646 | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | Hypothetical protein. | 0.773 |
hemL | ABB56679.1 | Synpcc7942_0645 | Synpcc7942_0647 | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | Conserved hypothetical protein. | 0.442 |
sek0027 | ABB56679.1 | Synpcc7942_0443 | Synpcc7942_0647 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.417 |