STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcxACytoplasmic membrane protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the Cema family. (421 aa)    
Predicted Functional Partners:
ABB57713.1
Conserved hypothetical protein; May have a regulatory function.
      
 0.854
irpA
Imelysin. Metallo peptidase. MEROPS family M75; IrpA occurs under iron-deficient growth conditions in cyanobacterium Synechococcus and disappears in cells recovering from iron starvation. It seems to be involved in iron acquisition, uptake or storage.
      
 0.802
ABB57020.1
Adenosylcobinamide kinase.
       0.777
ABB57862.1
Conserved hypothetical protein.
  
     0.767
ABB56941.1
Conserved hypothetical protein.
  
     0.761
ABB57280.1
Photosystem I reaction center subunit III precursor; PSI-F; plastocyanin; cyt c553; docking protein.
  
     0.753
ABB57107.1
Conserved hypothetical protein.
  
     0.751
ABB58299.1
Conserved hypothetical protein.
  
     0.749
ABB57161.1
Ferredoxin-thioredoxin reductase variable subunit.
  
     0.746
ABB57359.1
Conserved hypothetical protein.
 
     0.743
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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