Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB56203.1 | ABB56655.1 | Synpcc7942_0171 | Synpcc7942_0623 | Cysteine synthase. | Thioredoxin reductase. | 0.425 |
ABB56203.1 | ABB57166.1 | Synpcc7942_0171 | Synpcc7942_1136 | Cysteine synthase. | PBS lyase HEAT-like repeat. | 0.818 |
ABB56203.1 | ABB57496.1 | Synpcc7942_0171 | Synpcc7942_1466 | Cysteine synthase. | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.918 |
ABB56203.1 | ABB58575.1 | Synpcc7942_0171 | Synpcc7942_2545 | Cysteine synthase. | L-aspartate aminotransferase. | 0.905 |
ABB56203.1 | pepA | Synpcc7942_0171 | Synpcc7942_1190 | Cysteine synthase. | Leucyl aminopeptidase. Metallo peptidase. MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). | 0.824 |
ABB56217.1 | ABB57165.1 | Synpcc7942_0185 | Synpcc7942_1135 | Gamma-glutamyltransferase. Threonine peptidase. MEROPS family T03. | Cation transporter; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | 0.902 |
ABB56217.1 | ABB57166.1 | Synpcc7942_0185 | Synpcc7942_1136 | Gamma-glutamyltransferase. Threonine peptidase. MEROPS family T03. | PBS lyase HEAT-like repeat. | 0.911 |
ABB56217.1 | gshB | Synpcc7942_0185 | Synpcc7942_2324 | Gamma-glutamyltransferase. Threonine peptidase. MEROPS family T03. | Glutathione synthase. | 0.918 |
ABB56217.1 | pepA | Synpcc7942_0185 | Synpcc7942_1190 | Gamma-glutamyltransferase. Threonine peptidase. MEROPS family T03. | Leucyl aminopeptidase. Metallo peptidase. MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). | 0.922 |
ABB56655.1 | ABB56203.1 | Synpcc7942_0623 | Synpcc7942_0171 | Thioredoxin reductase. | Cysteine synthase. | 0.425 |
ABB56655.1 | ABB57496.1 | Synpcc7942_0623 | Synpcc7942_1466 | Thioredoxin reductase. | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.425 |
ABB56655.1 | glyA | Synpcc7942_0623 | Synpcc7942_0282 | Thioredoxin reductase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.453 |
ABB56655.1 | gshB | Synpcc7942_0623 | Synpcc7942_2324 | Thioredoxin reductase. | Glutathione synthase. | 0.422 |
ABB56655.1 | pepA | Synpcc7942_0623 | Synpcc7942_1190 | Thioredoxin reductase. | Leucyl aminopeptidase. Metallo peptidase. MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). | 0.699 |
ABB57165.1 | ABB56217.1 | Synpcc7942_1135 | Synpcc7942_0185 | Cation transporter; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Gamma-glutamyltransferase. Threonine peptidase. MEROPS family T03. | 0.902 |
ABB57165.1 | ABB57166.1 | Synpcc7942_1135 | Synpcc7942_1136 | Cation transporter; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | PBS lyase HEAT-like repeat. | 0.952 |
ABB57165.1 | gshB | Synpcc7942_1135 | Synpcc7942_2324 | Cation transporter; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Glutathione synthase. | 0.903 |
ABB57165.1 | pepA | Synpcc7942_1135 | Synpcc7942_1190 | Cation transporter; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Leucyl aminopeptidase. Metallo peptidase. MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides (By similarity). | 0.900 |
ABB57166.1 | ABB56203.1 | Synpcc7942_1136 | Synpcc7942_0171 | PBS lyase HEAT-like repeat. | Cysteine synthase. | 0.818 |
ABB57166.1 | ABB56217.1 | Synpcc7942_1136 | Synpcc7942_0185 | PBS lyase HEAT-like repeat. | Gamma-glutamyltransferase. Threonine peptidase. MEROPS family T03. | 0.911 |
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