STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57235.1Phage_integrase-like. (54 aa)    
Predicted Functional Partners:
ABB56168.1
Phage integrase.
   
 
 0.856
SEN0005
Transposase, IS605 OrfB.
      
 0.805
SEF0021
Conserved hypothetical protein.
       0.773
ABB58434.1
Conserved hypothetical protein.
   
    0.641
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
    0.625
ABB57233.1
Conserved hypothetical protein.
       0.572
ABB57234.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.572
ABB56795.1
Transcriptional regulator, XRE family.
  
  
 0.546
ABB56796.1
Transcriptional regulator, XRE family.
  
  
 0.546
ABB56692.1
Arogenate dehydrogenase (NADP).
  
    0.535
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.