STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57569.1Conserved hypothetical protein. (100 aa)    
Predicted Functional Partners:
ABB56330.1
Hypothetical protein.
  
     0.774
ABB57570.1
Conserved hypothetical protein.
 
     0.767
ABB58048.1
Conserved hypothetical protein.
  
     0.764
ABB58091.1
Conserved hypothetical protein.
  
     0.748
ABB57956.1
Conserved hypothetical protein.
  
     0.741
ABB57990.1
Conserved hypothetical protein.
  
     0.739
ABB56484.1
Conserved hypothetical protein.
  
     0.737
ABB58341.1
Conserved hypothetical protein.
  
     0.737
ABB57866.1
Conserved hypothetical protein.
  
     0.728
ABB57169.1
Conserved hypothetical protein.
  
     0.726
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.