STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57779.1Ferredoxin. (130 aa)    
Predicted Functional Partners:
ABB57780.1
Conserved hypothetical protein YCF35.
 
     0.894
ABB57781.1
Conserved hypothetical protein.
 
     0.806
ABB57778.1
Conserved hypothetical protein.
       0.773
ABB57558.1
Conserved hypothetical protein YCF49.
  
     0.770
ABB56951.1
Conserved hypothetical protein.
  
     0.769
ABB56197.1
Hypothetical protein.
  
     0.766
ABB57913.1
Conserved hypothetical protein YCF53.
  
     0.750
ABB58590.1
Acetyltransferase, GNAT family.
  
     0.748
ABB57973.1
Cell division protein Ftn2-like.
  
     0.725
ABB57777.1
Conserved hypothetical protein.
       0.720
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.