STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57780.1Conserved hypothetical protein YCF35. (128 aa)    
Predicted Functional Partners:
ABB57779.1
Ferredoxin.
 
     0.894
ABB57781.1
Conserved hypothetical protein.
 
  
 0.848
ABB57777.1
Conserved hypothetical protein.
 
     0.803
ABB57778.1
Conserved hypothetical protein.
       0.773
ABB57650.1
ATPase.
 
   
 0.763
ABB57278.1
Conserved hypothetical protein.
  
     0.744
ABB56143.1
DnaK protein-like; Belongs to the heat shock protein 70 family.
  
     0.725
ABB58569.1
Conserved hypothetical protein.
  
     0.724
ABB56699.1
Conserved hypothetical protein.
  
     0.702
ABB56546.1
Conserved hypothetical protein.
  
     0.698
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.