STRINGSTRING
ABB57805.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57805.1" - annotation not available in Synechococcus elongatus PCC7942
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57805.1annotation not available (321 aa)    
Predicted Functional Partners:
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (174 aa)
   
 
  0.791
ABB56612.1
annotation not available (605 aa)
 
        0.733
rsfS
Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (139 aa)
 
          0.713
ABB56433.1
annotation not available (161 aa)
         
  0.646
rpsU
annotation not available (57 aa)
              0.589
ABB57806.1
annotation not available (85 aa)
              0.586
ABB57803.1
annotation not available (105 aa)
              0.566
rpsP
annotation not available (82 aa)
              0.566
petE
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (125 aa)
           
  0.564
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (511 aa)
           
  0.562
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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