STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58055.1Probable glycosyltransferase. (361 aa)    
Predicted Functional Partners:
ABB58056.1
Probable glycosyltransferase.
 
  
 0.964
ABB58058.1
Probable glycosyltransferase.
    
0.863
ABB58057.1
Probable glycosly transferase.
  
    0.787
ABB57917.1
Probable mannosyltransferase.
  
     0.760
ABB56420.1
Probable glycosyltransferase.
  
     0.745
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.
   
 0.581
ABB58054.1
Conserved hypothetical protein.
       0.543
pgi
Glucose-6-phosphate isomerase.
  
  
 0.503
ABB58067.1
Conserved hypothetical protein.
    
 
 0.444
ABB57003.1
UDP-glucose 6-dehydrogenase.
 
 
  
 0.431
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.