STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58111.1Probable glycosyl transferase. (316 aa)    
Predicted Functional Partners:
ABB58056.1
Probable glycosyltransferase.
 
  
 0.915
ABB57408.1
Conserved hypothetical protein.
  
     0.734
ABB57638.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.721
SEF0032
Conserved hypothetical protein.
  
     0.663
ABB56153.1
Conserved hypothetical protein.
  
     0.638
ABB57156.1
ABC transporter permease protein.
  
  
 0.615
ABB56949.1
Conserved hypothetical protein.
  
     0.562
ABB56082.1
Conserved hypothetical protein.
 
  
0.561
ABB56245.1
Hypothetical protein.
  
  
 0.558
ABB58112.1
Elongation factor EF-G.
       0.558
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.