STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58177.1Conserved hypothetical protein. (136 aa)    
Predicted Functional Partners:
ABB58176.1
Hypothetical protein.
       0.773
ABB56442.1
Conserved hypothetical protein.
  
     0.588
ABB57091.1
Conserved hypothetical protein.
  
     0.555
ABB58174.1
Nuclease (SNase-like).
       0.545
ABB58175.1
Conserved hypothetical protein.
       0.545
ABB58178.1
ATPase.
       0.529
ABB57093.1
Conserved hypothetical protein.
  
     0.470
ABB57574.1
Panthotenate metabolism flavoprotein.
  
     0.453
ABB58179.1
ABC-2 type transport system permease protein.
       0.429
SEF0014
Virulence associated protein C; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   
 0.423
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.