Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB56672.1 | ABB56814.1 | Synpcc7942_0640 | Synpcc7942_0782 | ATPase. | ATPase. | 0.922 |
ABB56672.1 | ABB57935.1 | Synpcc7942_0640 | Synpcc7942_1905 | ATPase. | Cyclic nucleotide-binding domain (cNMP-BD) protein. | 0.623 |
ABB56672.1 | pstB | Synpcc7942_0640 | Synpcc7942_2441 | ATPase. | Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.900 |
ABB56814.1 | ABB56672.1 | Synpcc7942_0782 | Synpcc7942_0640 | ATPase. | ATPase. | 0.922 |
ABB56814.1 | ABB57935.1 | Synpcc7942_0782 | Synpcc7942_1905 | ATPase. | Cyclic nucleotide-binding domain (cNMP-BD) protein. | 0.633 |
ABB56814.1 | pstB | Synpcc7942_0782 | Synpcc7942_2441 | ATPase. | Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.900 |
ABB57342.1 | ABB57935.1 | Synpcc7942_1312 | Synpcc7942_1905 | ATPase. | Cyclic nucleotide-binding domain (cNMP-BD) protein. | 0.590 |
ABB57342.1 | pstB | Synpcc7942_1312 | Synpcc7942_2441 | ATPase. | Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.899 |
ABB57480.1 | ABB57942.1 | Synpcc7942_1450 | Synpcc7942_1912 | ATPase; Belongs to the ABC transporter superfamily. | Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. | 0.949 |
ABB57480.1 | ABB58472.1 | Synpcc7942_1450 | Synpcc7942_2442 | ATPase; Belongs to the ABC transporter superfamily. | Phosphate transport system permease protein 2. | 0.992 |
ABB57480.1 | ABB58473.1 | Synpcc7942_1450 | Synpcc7942_2443 | ATPase; Belongs to the ABC transporter superfamily. | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.990 |
ABB57480.1 | ABB58474.1 | Synpcc7942_1450 | Synpcc7942_2444 | ATPase; Belongs to the ABC transporter superfamily. | Phosphate binding protein. | 0.961 |
ABB57480.1 | pstB | Synpcc7942_1450 | Synpcc7942_2441 | ATPase; Belongs to the ABC transporter superfamily. | Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.911 |
ABB57480.1 | sphX | Synpcc7942_1450 | Synpcc7942_2445 | ATPase; Belongs to the ABC transporter superfamily. | Phosphate binding protein; May be involved in the system for phosphate transport across the cytoplasmic membrane. | 0.964 |
ABB57935.1 | ABB56672.1 | Synpcc7942_1905 | Synpcc7942_0640 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | ATPase. | 0.623 |
ABB57935.1 | ABB56814.1 | Synpcc7942_1905 | Synpcc7942_0782 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | ATPase. | 0.633 |
ABB57935.1 | ABB57342.1 | Synpcc7942_1905 | Synpcc7942_1312 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | ATPase. | 0.590 |
ABB57935.1 | pstB | Synpcc7942_1905 | Synpcc7942_2441 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.887 |
ABB57942.1 | ABB57480.1 | Synpcc7942_1912 | Synpcc7942_1450 | Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. | ATPase; Belongs to the ABC transporter superfamily. | 0.949 |
ABB57942.1 | ABB58472.1 | Synpcc7942_1912 | Synpcc7942_2442 | Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. | Phosphate transport system permease protein 2. | 0.986 |
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