STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58481.1Putative type IV pilus assembly protein PilO. (264 aa)    
Predicted Functional Partners:
ABB58482.1
Tfp pilus assembly protein PilN-like.
 
 
 0.999
ABB58483.1
Type IV pilus assembly protein PilM.
 
 
 0.992
ABB58480.1
General secretion pathway protein D.
 
   
 0.971
ABB58099.1
Fimbrial assembly protein PilC-like.
   
 
 0.951
ABB58101.1
ATPase.
  
 
 0.849
ABB58485.1
Conserved hypothetical protein.
 
     0.842
ABB58486.1
Conserved hypothetical protein.
 
     0.826
ABB56892.1
Conserved hypothetical protein.
  
   
 0.794
ABB56455.1
Conserved hypothetical protein.
  
     0.774
ABB56693.1
Conserved hypothetical protein.
  
     0.773
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.