STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D9U4Succinate-semialdehyde dehydrogenase. (535 aa)    
Predicted Functional Partners:
A0A1Y2EFJ6
Aminotransferase class-III-domain-containing protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.938
A0A1Y2DHI2
Tryptophan synthase.
  
 
 0.858
A0A1Y2E4A0
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.851
A0A1Y2DY61
Malate dehydrogenase.
  
 0.838
A0A1Y2E6U1
Fumarate hydratase.
    
 0.838
A0A1Y2EGN6
Malate dehydrogenase.
  
 0.838
A0A1Y2DH17
Aspartate aminotransferase.
    
 0.836
A0A1Y2DYC4
Oxoglutarate dehydrogenase.
   
 
 0.834
A0A1Y2EF25
Ornithine aminotransferase.
 
 0.833
A0A1Y2DLI4
ATP-citrate synthase subunit 2.
  
 0.832
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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