STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DA17Uncharacterized protein. (372 aa)    
Predicted Functional Partners:
A0A1Y2E229
PRP1 splicing factor.
    
 
 0.888
A0A1Y2EC57
NUC071 domain-domain-containing protein.
    
 
 0.845
A0A1Y2DLM0
Sec63 Brl domain-domain-containing protein.
    
 
 0.833
A0A1Y2DY29
SART-1 protein.
   
   0.824
A0A1Y2EFD0
Pinin/SDK/memA/ protein conserved region-domain-containing protein.
   
  0.814
A0A1Y2EI87
Uncharacterized protein.
    
   0.814
A0A1Y2D6Q9
WD repeat-containing protein.
    
 
 0.812
A0A1Y2E595
Splicing factor 3B subunit 1.
   
 
 0.797
A0A1Y2E4I0
Prp31 C terminal domain-containing protein.
    
 
 0.792
A0A1Y2DSS5
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family.
   
 0.787
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.