STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DAM8Uncharacterized protein. (271 aa)    
Predicted Functional Partners:
A0A1Y2D767
Transcription initiation factor IID, 18kD subunit-domain-containing protein.
    
 0.999
A0A1Y2DD86
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
   
 0.999
A0A1Y2EKG2
WD40-repeat-containing domain protein.
    
 0.999
A0A1Y2ELA5
TATA box binding protein associated factor.
    
 0.999
A0A1Y2DHV6
Transcription initiation factor TFIID subunit A-domain-containing protein.
   
 0.995
A0A1Y2E2Q8
TAFII55 protein conserved region-domain-containing protein.
    
 0.995
A0A1Y2EAQ7
Uncharacterized protein.
    
 0.995
A0A1Y2D6C4
DUF3591 domain-containing protein.
    
 0.994
A0A1Y2DXW7
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.992
A0A1Y2EIY7
Histone-fold-containing protein.
    
 0.983
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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