STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DCC3Putative cleavage and polyadenylation specifity factor, 73 kDa subunit. (834 aa)    
Predicted Functional Partners:
A0A1Y2DQ40
Cleavage and polyadenylation specificity factor subunit 2.
   
0.999
A0A1Y2DSG1
DUF3453 domain-containing protein.
   
 0.999
A0A1Y2EAR9
CPSF A subunit region-domain-containing protein.
   
 0.999
A0A1Y2EDU3
Protein PFS2.
   
 0.999
A0A1Y2DKH2
Fip1 motif-domain-containing protein.
    
 0.998
A0A1Y2DV89
DWNN domain-domain-containing protein.
    
 0.998
A0A1Y2E3F6
YT521-B-like domain-domain-containing protein.
   
 0.998
A0A1Y2EFB2
Uncharacterized protein.
   
 0.998
A0A1Y2EDB5
WD domain-containing protein.
   
 0.995
A0A1Y2EF52
Protein SSU72.
   
 0.994
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.