STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DDV5Signal peptidase complex catalytic subunit SEC11. (176 aa)    
Predicted Functional Partners:
A0A1Y2EDI5
Microsomal signal peptidase 12 kDa subunit-domain-containing protein.
   
 0.963
A0A1Y2EK11
Signal peptidase subunit-domain-containing protein.
   
 0.962
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.953
A0A1Y2DBV5
Ubiquitin-conjugating enzyme/RWD-like protein.
 
   
  0.913
A0A1Y2DBX5
RNA polymerase Rpb7.
 
 
    0.895
A0A1Y2ED23
Uncharacterized protein.
   
 0.854
A0A1Y2E0B9
DEP domain-containing protein.
    
 0.762
A0A1Y2E7U1
WD repeat-containing protein.
    
 0.739
A0A1Y2EAJ9
Nitrogen permease regulator 2.
    
 0.709
A0A1Y2DEY3
WD_REPEATS_REGION domain-containing protein.
    
 0.657
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.